Difference between revisions of "SJ00680"

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(Created page with "Category:gene == Gene SJ04262 == * transcription-direction: ** negative * right-end-position: ** 108415 * left-end-position: ** 101221 * centisome-position: ** 92.824974...")
(Created page with "Category:gene == Gene SJ14925 == * transcription-direction: ** positive * right-end-position: ** 31733 * left-end-position: ** 21400 * centisome-position: ** 7.0236936...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04262 ==
+
== Gene SJ14925 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 108415
+
** 31733
 
* left-end-position:
 
* left-end-position:
−
** 101221
+
** 21400
 
* centisome-position:
 
* centisome-position:
−
** 92.824974    
+
** 7.0236936    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DIACYLGLYKIN-RXN]]
+
* [[PYRUVDEH-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12508]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NAD-KIN-RXN]]
+
* [[RXN-12583]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-1134]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7039]]
+
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7817]]
+
* [[PWY-7218]]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''7''' reactions found over '''4''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY-1]]
+
* [[PWY-5482]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5537]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7269]]
+
* [[PWY-6886]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7268]]
+
* [[PWY-7384]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[PYRUVDEHYD-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5083]]
+
{{#set: transcription-direction=positive}}
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=31733}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=21400}}
−
{{#set: right-end-position=108415}}
+
{{#set: centisome-position=7.0236936   }}
−
{{#set: left-end-position=101221}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: centisome-position=92.824974   }}
+
{{#set: nb reaction associated=4}}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=2}}
 
 
{{#set: nb pathway associated=7}}
 
{{#set: nb pathway associated=7}}

Revision as of 20:23, 18 December 2020

Gene SJ14925

  • transcription-direction:
    • positive
  • right-end-position:
    • 31733
  • left-end-position:
    • 21400
  • centisome-position:
    • 7.0236936

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLYCOLYSIS-TCA-GLYOX-BYPASS
    • 3 reactions found over 1 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • PWY-5482
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5537
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PYRUVDEHYD-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00680&oldid=42698"