Difference between revisions of "SJ10055"

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(Created page with "Category:gene == Gene SJ04851 == * transcription-direction: ** negative * right-end-position: ** 12377 * left-end-position: ** 2540 * centisome-position: ** 2.564465 =...")
(Created page with "Category:gene == Gene SJ00680 == * transcription-direction: ** positive * right-end-position: ** 42809 * left-end-position: ** 36401 * centisome-position: ** 22.276962...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04851 ==
+
== Gene SJ00680 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 12377
+
** 42809
 
* left-end-position:
 
* left-end-position:
−
** 2540
+
** 36401
 
* centisome-position:
 
* centisome-position:
−
** 2.564465    
+
** 22.276962    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12720]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.64-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[AMINOCYL-TRNA-HYDROLASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[CARBOXYLESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12460]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[SULFATE-ADENYLYLTRANS-RXN]]
+
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16637]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6932]]
+
* [[PWY-6303]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5278]]
+
* [[PWY490-4]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[DISSULFRED-PWY]]
 
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[P224-PWY]]
+
* [[PWY-6857]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6683]]
+
* [[PWY-6308]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[SULFMETII-PWY]]
+
{{#set: transcription-direction=positive}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=42809}}
−
* [[PWY-5340]]
+
{{#set: left-end-position=36401}}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=22.276962   }}
−
{{#set: transcription-direction=negative}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: right-end-position=12377}}
+
{{#set: nb reaction associated=11}}
−
{{#set: left-end-position=2540}}
+
{{#set: nb pathway associated=4}}
−
{{#set: centisome-position=2.564465   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=7}}
 

Revision as of 20:23, 18 December 2020

Gene SJ00680

  • transcription-direction:
    • positive
  • right-end-position:
    • 42809
  • left-end-position:
    • 36401
  • centisome-position:
    • 22.276962

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY490-4
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6308
    • 1 reactions found over 3 reactions in the full pathway




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