Difference between revisions of "SJ00450"

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(Created page with "Category:gene == Gene SJ12149 == * transcription-direction: ** negative * right-end-position: ** 138403 * left-end-position: ** 132273 * centisome-position: ** 36.5864...")
(Created page with "Category:gene == Gene SJ04530 == * transcription-direction: ** positive * right-end-position: ** 52777 * left-end-position: ** 52283 * centisome-position: ** 49.36084...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12149 ==
+
== Gene SJ04530 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 138403
+
** 52777
 
* left-end-position:
 
* left-end-position:
−
** 132273
+
** 52283
 
* centisome-position:
 
* centisome-position:
−
** 36.5864    
+
** 49.36084    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ERYTHRULOSE-REDUCTASE-RXN]]
+
* [[3.1.26.4-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[L-XYLULOSE-REDUCTASE-RXN]]
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17773]]
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-9524]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[orthology]]
+
{{#set: right-end-position=52777}}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=52283}}
−
* [[RXN-9528]]
+
{{#set: centisome-position=49.36084   }}
−
** Category: [[orthology]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: nb reaction associated=3}}
−
* [[RXN-9536]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7786]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5525]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5515]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5994]]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5971]]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=138403}}
 
−
{{#set: left-end-position=132273}}
 
−
{{#set: centisome-position=36.5864   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=6}}
 
−
{{#set: nb pathway associated=5}}
 

Revision as of 20:26, 18 December 2020

Gene SJ04530

  • transcription-direction:
    • positive
  • right-end-position:
    • 52777
  • left-end-position:
    • 52283
  • centisome-position:
    • 49.36084

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00450&oldid=43997"