Difference between revisions of "SJ15979"

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(Created page with "Category:gene == Gene SJ16573 == * transcription-direction: ** negative * right-end-position: ** 73954 * left-end-position: ** 62145 * centisome-position: ** 22.2392 =...")
(Created page with "Category:gene == Gene SJ02191 == * transcription-direction: ** positive * right-end-position: ** 470135 * left-end-position: ** 463533 * centisome-position: ** 85.28588...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16573 ==
+
== Gene SJ02191 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 73954
+
** 470135
 
* left-end-position:
 
* left-end-position:
−
** 62145
+
** 463533
 
* centisome-position:
 
* centisome-position:
−
** 22.2392    
+
** 85.28588    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
* [[3.4.11.18-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ACID-PHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17873]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17874]]
+
* [[RXN-12613]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17875]]
+
* [[RXN-5822]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17876]]
+
* [[THIAMINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17877]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17878]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7800]]
+
* [[PWY-6348]]
−
** '''6''' reactions found over '''21''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7799]]
+
* [[PWY-6899]]
−
** '''7''' reactions found over '''14''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[NAD-BIOSYNTHESIS-II]]
−
{{#set: right-end-position=73954}}
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=62145}}
+
* [[NADPHOS-DEPHOS-PWY]]
−
{{#set: centisome-position=22.2392   }}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
* [[PWY-5083]]
−
{{#set: nb reaction associated=7}}
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
{{#set: nb pathway associated=2}}
+
* [[PWY-7356]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=470135}}
 +
{{#set: left-end-position=463533}}
 +
{{#set: centisome-position=85.28588   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=6}}

Revision as of 20:27, 18 December 2020

Gene SJ02191

  • transcription-direction:
    • positive
  • right-end-position:
    • 470135
  • left-end-position:
    • 463533
  • centisome-position:
    • 85.28588

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6348
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6899
    • 1 reactions found over 2 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 4 reactions found over 3 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7356
    • 6 reactions found over 7 reactions in the full pathway




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