Difference between revisions of "SJ08640"

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(Created page with "Category:gene == Gene SJ05616 == * transcription-direction: ** positive * right-end-position: ** 346548 * left-end-position: ** 334298 * centisome-position: ** 67.715385...")
(Created page with "Category:gene == Gene SJ06000 == * transcription-direction: ** negative * right-end-position: ** 25678 * left-end-position: ** 1091 * centisome-position: ** 0.22588554...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05616 ==
+
== Gene SJ06000 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 346548
+
** 25678
 
* left-end-position:
 
* left-end-position:
−
** 334298
+
** 1091
 
* centisome-position:
 
* centisome-position:
−
** 67.715385    
+
** 0.22588554    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.7.11.24-RXN]]
−
* [[1.1.1.145-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NADH-DEHYDROGENASE-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12693]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
−
* [[RXN-12747]]
+
{{#set: right-end-position=25678}}
−
** Category: [[annotation]]
+
{{#set: left-end-position=1091}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=0.22588554   }}
−
* [[RXN-12789]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
** Category: [[annotation]]
+
{{#set: nb reaction associated=2}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-342]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-350]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-353]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY-6946]]
 
−
** '''6''' reactions found over '''22''' reactions in the full pathway
 
−
* [[PWY-6944]]
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
−
* [[PWY-6948]]
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY66-378]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7299]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=346548}}
 
−
{{#set: left-end-position=334298}}
 
−
{{#set: centisome-position=67.715385   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=8}}
 
−
{{#set: nb pathway associated=5}}
 

Revision as of 20:27, 18 December 2020

Gene SJ06000

  • transcription-direction:
    • negative
  • right-end-position:
    • 25678
  • left-end-position:
    • 1091
  • centisome-position:
    • 0.22588554

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08640&oldid=44609"