Difference between revisions of "CPD-2187"

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(Created page with "Category:gene == Gene SJ17407 == * transcription-direction: ** positive * right-end-position: ** 77017 * left-end-position: ** 70439 * centisome-position: ** 26.790222...")
(Created page with "Category:metabolite == Metabolite GAP == * common-name: ** d-glyceraldehyde 3-phosphate * smiles: ** [ch](=o)c(o)cop(=o)([o-])[o-] * inchi-key: ** lxjxrirhzlfyrp-vkhmyheas...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ17407 ==
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== Metabolite GAP ==
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* transcription-direction:
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* common-name:
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** positive
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** d-glyceraldehyde 3-phosphate
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* right-end-position:
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* smiles:
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** 77017
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** [ch](=o)c(o)cop(=o)([o-])[o-]
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* left-end-position:
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* inchi-key:
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** 70439
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** lxjxrirhzlfyrp-vkhmyheasa-l
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* centisome-position:
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* molecular-weight:
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** 26.790222   
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** 168.043
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[1TRANSKETO-RXN]]
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== Reaction(s) associated ==
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* [[2TRANSKETO-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[DEHYDDEOXPHOSGALACT-ALDOL-RXN]]
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* [[ATPASE-RXN]]
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* [[DXS-RXN]]
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** Category: [[annotation]]
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* [[F16ALDOLASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[FBA_]]
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** Category: [[orthology]]
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* [[GAPDHSYNEC-RXN]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[GAPDH_]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GAPOXNPHOSPHN-RXN]]
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* [[ATPSYN-RXN]]
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* [[RXN-11322]]
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** Category: [[annotation]]
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* [[RXN-12590]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-3443]]
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** Category: [[orthology]]
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* [[RXN0-2381]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[TRANSALDOL-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[1TRANSKETO-RXN]]
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* [[RXN-12195]]
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* [[2TRANSKETO-RXN]]
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** Category: [[annotation]]
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* [[DEHYDDEOXPHOSGALACT-ALDOL-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[F16ALDOLASE-RXN]]
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* [[RXN-12196]]
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* [[FBA_]]
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** Category: [[annotation]]
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* [[GAPDHSYNEC-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GAPDH_]]
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* [[RXN0-5462]]
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* [[GAPOXNPHOSPHN-RXN]]
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** Category: [[annotation]]
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* [[KDPGALDOL-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-2381]]
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</div>
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* [[TAGAALDOL-RXN]]
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== Pathway(s) associated ==
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* [[TRANSALDOL-RXN]]
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* [[PWY-7219]]
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* [[TRIOKINASE-RXN]]
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** '''4''' reactions found over '''3''' reactions in the full pathway
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* [[TRIOSEPISOMERIZATION-RXN]]
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* [[PWY-7210]]
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* [[TRYPSYN-RXN]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reaction(s) of unknown directionality ==
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* [[PWY-7198]]
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{{#set: common-name=d-glyceraldehyde 3-phosphate}}
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** '''6''' reactions found over '''7''' reactions in the full pathway
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{{#set: inchi-key=inchikey=lxjxrirhzlfyrp-vkhmyheasa-l}}
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* [[PWY-7184]]
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{{#set: molecular-weight=168.043}}
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=77017}}
 
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{{#set: left-end-position=70439}}
 
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{{#set: centisome-position=26.790222    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=6}}
 
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{{#set: nb pathway associated=5}}
 

Revision as of 20:31, 18 December 2020

Metabolite GAP

  • common-name:
    • d-glyceraldehyde 3-phosphate
  • smiles:
    • [ch](=o)c(o)cop(=o)([o-])[o-]
  • inchi-key:
    • lxjxrirhzlfyrp-vkhmyheasa-l
  • molecular-weight:
    • 168.043

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-2187&oldid=46085"