Difference between revisions of "SJ10393"
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(Created page with "Category:gene == Gene SJ16326 == * transcription-direction: ** positive * right-end-position: ** 145990 * left-end-position: ** 138347 * centisome-position: ** 48.526634...") |
(Created page with "Category:gene == Gene SJ13642 == * transcription-direction: ** negative * right-end-position: ** 222164 * left-end-position: ** 208915 * centisome-position: ** 62.92393...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13642 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 222164 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 208915 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 62.92393 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GLYOXYLATE-REDUCTASE-NADP+-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[HYDROXYPYRUVATE-REDUCTASE-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[KETOGLUTREDUCT-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[PGLYCDEHYDROG-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-16701]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-1622]] |
| − | ** '''6''' reactions found over '''11''' reactions in the full pathway | + | ** '''6''' reactions found over '''13''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[P162-PWY]] |
| − | {{#set: right-end-position= | + | ** '''7''' reactions found over '''11''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[SERSYN-PWY]] |
| − | {{#set: centisome-position= | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=222164}} | ||
| + | {{#set: left-end-position=208915}} | ||
| + | {{#set: centisome-position=62.92393 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 14:20, 26 August 2019
Contents
Gene SJ13642
- transcription-direction:
- negative
- right-end-position:
- 222164
- left-end-position:
- 208915
- centisome-position:
- 62.92393
Organism(s) associated with this gene
Reaction(s) associated
- GLYOXYLATE-REDUCTASE-NADP+-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HYDROXYPYRUVATE-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- KETOGLUTREDUCT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PGLYCDEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-16701
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-1622
- 6 reactions found over 13 reactions in the full pathway
- P162-PWY
- 7 reactions found over 11 reactions in the full pathway
- SERSYN-PWY
- 3 reactions found over 3 reactions in the full pathway
