Difference between revisions of "CPD1F-140"

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(Created page with "Category:gene == Gene SJ04504 == * transcription-direction: ** negative * right-end-position: ** 420260 * left-end-position: ** 397738 * centisome-position: ** 77.96308...")
(Created page with "Category:metabolite == Metabolite HOMO-SER == * common-name: ** l-homoserine * smiles: ** c(co)c([n+])c([o-])=o * inchi-key: ** ukauyvftdyckqa-vkhmyheasa-n * molecular-wei...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ04504 ==
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== Metabolite HOMO-SER ==
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* transcription-direction:
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* common-name:
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** negative
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** l-homoserine
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* right-end-position:
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* smiles:
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** 420260
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** c(co)c([n+])c([o-])=o
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* left-end-position:
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* inchi-key:
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** 397738
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** ukauyvftdyckqa-vkhmyheasa-n
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* centisome-position:
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* molecular-weight:
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** 77.96308   
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** 119.12
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[CYSTATHIONASE-RXN]]
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== Reaction(s) associated ==
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* [[HOMOSERDEAM-RXN]]
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* [[ATPASE-RXN]]
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* [[HOMOSERINE-O-ACETYLTRANSFERASE-RXN]]
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** Category: [[annotation]]
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* [[HOMOSERKIN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[HOMSUCTRAN-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[RXN-14049]]
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** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[CYSTATHIONASE-RXN]]
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* [[RXN-12195]]
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* [[HOMOSERDEHYDROG-RXN]]
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** Category: [[annotation]]
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* [[HOMOSERINE-O-ACETYLTRANSFERASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RXN-12196]]
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{{#set: common-name=l-homoserine}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=ukauyvftdyckqa-vkhmyheasa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=119.12}}
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=420260}}
 
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{{#set: left-end-position=397738}}
 
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{{#set: centisome-position=77.96308    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=5}}
 
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{{#set: nb pathway associated=4}}
 

Revision as of 20:33, 18 December 2020

Metabolite HOMO-SER

  • common-name:
    • l-homoserine
  • smiles:
    • c(co)c([n+])c([o-])=o
  • inchi-key:
    • ukauyvftdyckqa-vkhmyheasa-n
  • molecular-weight:
    • 119.12

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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