Difference between revisions of "CPD-22095"

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(Created page with "Category:gene == Gene SJ09370 == * transcription-direction: ** negative * right-end-position: ** 487330 * left-end-position: ** 478266 * centisome-position: ** 58.27843...")
(Created page with "Category:metabolite == Metabolite 3-Hydroxy-Terminated-DNAs == * common-name: ** a [dna]-3'-hydroxyl == Reaction(s) known to consume the compound == * DNA-LIGASE-ATP-RXN...")
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ09370 ==
+
== Metabolite 3-Hydroxy-Terminated-DNAs ==
* transcription-direction:
+
* common-name:
** negative
+
** a [dna]-3'-hydroxyl
* right-end-position:
+
== Reaction(s) known to consume the compound ==
** 487330
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* [[DNA-LIGASE-ATP-RXN]]
* left-end-position:
+
* [[DNA-LIGASE-NAD+-RXN]]
** 478266
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* [[RXN-15712]]
* centisome-position:
+
* [[RXN-15713]]
** 58.27843   
+
* [[RXN-17919]]
== Organism(s) associated with this gene  ==
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* [[RXN-17923]]
* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
* [[RXN-10642]]
+
{{#set: common-name=a [dna]-3'-hydroxyl}}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[UROGENDECARBOX-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7766]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[CHLOROPHYLL-SYN]]
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
* [[HEME-BIOSYNTHESIS-II]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7159]]
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY0-1415]]
 
** '''5''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5531]]
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
* [[HEMESYN2-PWY]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=487330}}
 
{{#set: left-end-position=478266}}
 
{{#set: centisome-position=58.27843    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=7}}
 

Revision as of 20:33, 18 December 2020

Metabolite 3-Hydroxy-Terminated-DNAs

  • common-name:
    • a [dna]-3'-hydroxyl

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Property "Common-name" (as page type) with input value "a [dna]-3'-hydroxyl" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.