Difference between revisions of "4-AMINO-BUTYRATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] == * direction: ** left-to-right * common-name: ** 3-ketoacyl-coa thiolase **...")
(Created page with "Category:metabolite == Metabolite E-PHENYLITACONYL-COA == * common-name: ** (e)-2-benzylidenesuccinyl-coa * smiles: ** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=...")
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] ==
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== Metabolite E-PHENYLITACONYL-COA ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** 3-ketoacyl-coa thiolase
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** (e)-2-benzylidenesuccinyl-coa
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** acetyl-coa c-acyltransferase
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* smiles:
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* ec-number:
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** cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=cc=cc=1))cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-]
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** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
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* inchi-key:
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== Reaction formula ==
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** cizckpngzpendv-umuuvtgisa-i
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* 1 [[CO-A]][c] '''+''' 1 [[CPD-15687]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15688]][c]
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* molecular-weight:
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== Gene(s) associated with this reaction  ==
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** 950.677
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* Gene: [[SJ21818]]
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== Reaction(s) known to consume the compound ==
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** Category: [[annotation]]
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* [[RXN-902]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
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* Gene: [[SJ09371]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(e)-2-benzylidenesuccinyl-coa}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: inchi-key=inchikey=cizckpngzpendv-umuuvtgisa-i}}
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* Gene: [[SJ14898]]
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{{#set: molecular-weight=950.677}}
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ16470]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ21817]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
 
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** '''5''' reactions found over '''10''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=acetyl-coa c-acyltransferase|3-ketoacyl-coa thiolase}}
 
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{{#set: ec-number=ec-2.3.1.16}}
 
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{{#set: nb gene associated=5}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 20:35, 18 December 2020

Metabolite E-PHENYLITACONYL-COA

  • common-name:
    • (e)-2-benzylidenesuccinyl-coa
  • smiles:
    • cc(c)(c(o)c(=o)nccc(=o)nccsc(=o)c(cc(=o)[o-])=cc1(c=cc=cc=1))cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-]
  • inchi-key:
    • cizckpngzpendv-umuuvtgisa-i
  • molecular-weight:
    • 950.677

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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