Difference between revisions of "Ditrans-polycis-polyprenols"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2144 RXN0-2144] == * direction: ** left-to-right * common-name: ** 3-hydroxy cis δ5-dode...")
(Created page with "Category:metabolite == Metabolite tRNA-containing-5Me-uridine54 == * common-name: ** a 5-methyluracil54 in trna == Reaction(s) known to consume the compound == == Reaction...")
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2144 RXN0-2144] ==
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== Metabolite tRNA-containing-5Me-uridine54 ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** 3-hydroxy cis δ5-dodecenoyl-[acp] dehydratase
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** a 5-methyluracil54 in trna
* ec-number:
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== Reaction(s) known to consume the compound ==
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
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== Reaction(s) known to produce the compound ==
== Reaction formula ==
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* [[TRNA-URACIL-5--METHYLTRANSFERASE-RXN]]
* 1 [[b-Hydroxy-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[Trans-D3-cis-D5-dodecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) of unknown directionality ==
== Gene(s) associated with this reaction  ==
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{{#set: common-name=a 5-methyluracil54 in trna}}
* Gene: [[SJ10275]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s) ==
 
* [[PWY-7858]], (5Z)-dodecenoate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7858 PWY-7858]
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=3-hydroxy cis δ5-dodecenoyl-[acp] dehydratase}}
 
{{#set: ec-number=ec-4.2.1.59}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 20:36, 18 December 2020

Metabolite tRNA-containing-5Me-uridine54

  • common-name:
    • a 5-methyluracil54 in trna

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality