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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-ARGININE-DEIMINASE-RXN PROTEIN-ARGININE-DEIMINASE-RXN] == | + | == Metabolite Menaquinones == |
| − | * direction:
| |
| − | ** left-to-right
| |
| | * common-name: | | * common-name: |
| − | ** protein-arginine deiminase | + | ** a menaquinone |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/3.5.3.15 ec-3.5.3.15]
| + | * [[RXN-15740]] |
| − | == Reaction formula == | + | * [[RXN0-6554]] |
| − | * 1 [[Protein-L-Arginines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTEIN-L-CITRULLINE]][c]
| + | == Reaction(s) known to produce the compound == |
| − | == Gene(s) associated with this reaction ==
| + | * [[RXN-14107]] |
| − | * Gene: [[SJ16434]] | + | == Reaction(s) of unknown directionality == |
| − | ** Category: [[annotation]]
| + | {{#set: common-name=a menaquinone}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[PWY-4921]], protein citrullination: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4921 PWY-4921] | |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| |
| − | == Reconstruction information == | |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | == External links ==
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| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18090 18090]
| |
| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02621 R02621]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/Q08642 Q08642]
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| − | ** [http://www.uniprot.org/uniprot/P20717 P20717]
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| − | ** [http://www.uniprot.org/uniprot/P70708 P70708]
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| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=protein-arginine deiminase}} | |
| − | {{#set: ec-number=ec-3.5.3.15}}
| |
| − | {{#set: nb gene associated=1}}
| |
| − | {{#set: nb pathway associated=1}}
| |
| − | {{#set: reconstruction category=annotation|orthology}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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