Difference between revisions of "RIBOSYLPYRIMIDINE-NUCLEOSIDASE-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.113-RXN 2.1.1.113-RXN] == * direction: ** left-to-right * common-name: ** site-specific dna-m...") |
(Created page with "Category:reaction == Reaction CTPSYN-RXN == * direction: ** left-to-right * common-name: ** ctp synthase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.2 ec-6.3.4.2] =...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction CTPSYN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** ctp synthase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.3.4.2 ec-6.3.4.2] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[UTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[GLT]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ07094]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ13618]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-7185]], UTP and CTP dephosphorylation I: | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7176]], UTP and CTP de novo biosynthesis: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7177]], UTP and CTP dephosphorylation II: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26427 26427] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00573 R00573] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q58574 Q58574] |
+ | ** [http://www.uniprot.org/uniprot/P44341 P44341] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PJ84 Q9PJ84] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JTK1 Q9JTK1] | ||
+ | ** [http://www.uniprot.org/uniprot/P28595 P28595] | ||
+ | ** [http://www.uniprot.org/uniprot/P28274 P28274] | ||
+ | ** [http://www.uniprot.org/uniprot/P38627 P38627] | ||
+ | ** [http://www.uniprot.org/uniprot/P53529 P53529] | ||
+ | ** [http://www.uniprot.org/uniprot/P74208 P74208] | ||
+ | ** [http://www.uniprot.org/uniprot/P13242 P13242] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A7E5 P0A7E5] | ||
+ | ** [http://www.uniprot.org/uniprot/P17812 P17812] | ||
+ | ** [http://www.uniprot.org/uniprot/O64753 O64753] | ||
+ | ** [http://www.uniprot.org/uniprot/O04252 O04252] | ||
+ | ** [http://www.uniprot.org/uniprot/O65445 O65445] | ||
+ | ** [http://www.uniprot.org/uniprot/O74638 O74638] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=ctp synthase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-6.3.4.2}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus| | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} |
Revision as of 20:39, 18 December 2020
Contents
Reaction CTPSYN-RXN
- direction:
- left-to-right
- common-name:
- ctp synthase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 GLN[c] + 1 UTP[c] + 1 WATER[c] => 1 ADP[c] + 1 CTP[c] + 1 GLT[c] + 2 PROTON[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ07094
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ13618
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7185, UTP and CTP dephosphorylation I:
- 5 reactions found over 7 reactions in the full pathway
- PWY-7176, UTP and CTP de novo biosynthesis:
- 3 reactions found over 3 reactions in the full pathway
- PWY-7177, UTP and CTP dephosphorylation II:
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links