Difference between revisions of "RXN-12625"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] == * direction: ** left-to-right * common-name: ** guanosine-3',5'-bis(diphosp...")
(Created page with "Category:reaction == Reaction 2.1.1.127-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.127 ec-2.1.1.127] == Reaction formula == *...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] ==
+
== Reaction 2.1.1.127-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
 
** guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.1.7.2 ec-3.1.7.2]
+
** [http://enzyme.expasy.org/EC/2.1.1.127 ec-2.1.1.127]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GDP-TP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GTP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Rubisco-lysine]][c] '''+''' 3 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 3 [[ADENOSYL-HOMO-CYS]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[Rubisco-trimethylated-lysine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ10100]]
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* Gene: [[SJ20910]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ13961]]
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* Gene: [[SJ04321]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ14690]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ07200]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33056 33056]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50997 50997]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P94026 P94026]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=guanosine-3',5'-bis(diphosphate) 3'-diphosphatase|guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase}}
+
{{#set: ec-number=ec-2.1.1.127}}
{{#set: ec-number=ec-3.1.7.2}}
+
{{#set: nb gene associated=2}}
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:39, 18 December 2020

Reaction 2.1.1.127-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links