Difference between revisions of "3.4.14.9-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...") |
(Created page with "Category:reaction == Reaction GCVT-RXN == * direction: ** reversible * common-name: ** aminomethyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2.10 ec-2.1....") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction GCVT-RXN == |
− | * | + | * direction: |
− | + | ** reversible | |
− | ** | ||
− | |||
− | |||
* common-name: | * common-name: | ||
− | ** | + | ** aminomethyltransferase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/2.1.2.10 ec-2.1.2.10] |
− | * [[ | + | == Reaction formula == |
− | * [[ | + | * 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] |
− | * [[ | + | == Gene(s) associated with this reaction == |
− | == | + | * Gene: [[SJ16345]] |
− | + | ** Category: [[orthology]] | |
− | {{#set: | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | {{#set: common-name= | + | * Gene: [[SJ19914]] |
− | {{#set: nb | + | ** Category: [[orthology]] |
− | {{#set: | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | {{#set: | + | * Gene: [[SJ08557]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | == Pathway(s) == | ||
+ | * [[GLYCLEAV-PWY]], glycine cleavage: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R04125 R04125] | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16945 16945] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P25285 P25285] | ||
+ | ** [http://www.uniprot.org/uniprot/P28337 P28337] | ||
+ | ** [http://www.uniprot.org/uniprot/P27248 P27248] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UZP8 Q9UZP8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVP2 Q9JVP2] | ||
+ | ** [http://www.uniprot.org/uniprot/P48728 P48728] | ||
+ | ** [http://www.uniprot.org/uniprot/P49364 P49364] | ||
+ | ** [http://www.uniprot.org/uniprot/P49095 P49095] | ||
+ | ** [http://www.uniprot.org/uniprot/P49363 P49363] | ||
+ | ** [http://www.uniprot.org/uniprot/P54260 P54260] | ||
+ | ** [http://www.uniprot.org/uniprot/P49361 P49361] | ||
+ | ** [http://www.uniprot.org/uniprot/P49362 P49362] | ||
+ | ** [http://www.uniprot.org/uniprot/O49954 O49954] | ||
+ | ** [http://www.uniprot.org/uniprot/P93256 P93256] | ||
+ | ** [http://www.uniprot.org/uniprot/O32955 O32955] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=aminomethyltransferase}} | ||
+ | {{#set: ec-number=ec-2.1.2.10}} | ||
+ | {{#set: nb gene associated=3}} | ||
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 20:45, 18 December 2020
Contents
Reaction GCVT-RXN
- direction:
- reversible
- common-name:
- aminomethyltransferase
- ec-number:
Reaction formula
- 1 AMINOMETHYLDIHYDROLIPOYL-GCVH[c] + 1 THF-GLU-N[c] <=> 1 AMMONIUM[c] + 1 DIHYDROLIPOYL-GCVH[c] + 1 METHYLENE-THF-GLU-N[c]
Gene(s) associated with this reaction
- Gene: SJ16345
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ19914
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ08557
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- GLYCLEAV-PWY, glycine cleavage:
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links