Difference between revisions of "ACCOAth"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6899 PWY-6899] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...") |
(Created page with "Category:reaction == Reaction 1.14.21.6-RXN == * direction: ** left-to-right * common-name: ** 5α-cholest-7-en-3β-ol,nad(p)h:oxygen 5-oxidoreductase * ec-number...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction 1.14.21.6-RXN == |
− | * | + | * direction: |
− | ** | + | ** left-to-right |
− | |||
− | |||
* common-name: | * common-name: | ||
− | ** | + | ** 5α-cholest-7-en-3β-ol,nad(p)h:oxygen 5-oxidoreductase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/1.14.19.20 ec-1.14.19.20] |
− | == | + | == Reaction formula == |
− | * [http:// | + | * 1 [[CPD-4186]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-4187]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c] |
− | {{#set: | + | == Gene(s) associated with this reaction == |
− | {{#set: common-name= | + | * Gene: [[SJ00834]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | {{#set: nb | + | * Gene: [[SJ11625]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | == Pathway(s) == | ||
+ | * [[PWY66-341]], cholesterol biosynthesis I: | ||
+ | ** '''14''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol): | ||
+ | ** '''12''' reactions found over '''18''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18924 18924] | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18920 18920] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R07215 R07215] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=5α-cholest-7-en-3β-ol,nad(p)h:oxygen 5-oxidoreductase}} | ||
+ | {{#set: ec-number=ec-1.14.19.20}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=2}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 20:45, 18 December 2020
Contents
Reaction 1.14.21.6-RXN
- direction:
- left-to-right
- common-name:
- 5α-cholest-7-en-3β-ol,nad(p)h:oxygen 5-oxidoreductase
- ec-number:
Reaction formula
- 1 CPD-4186[c] + 2 FERROCYTOCHROME-B5[c] + 1 OXYGEN-MOLECULE[c] + 2 PROTON[c] => 1 CPD-4187[c] + 2 FERRICYTOCHROME-B5[c] + 2 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ00834
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ11625
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY66-341, cholesterol biosynthesis I:
- 14 reactions found over 18 reactions in the full pathway
- PWY66-3, cholesterol biosynthesis II (via 24,25-dihydrolanosterol):
- 12 reactions found over 18 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links