Difference between revisions of "SJ21941"
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(Created page with "Category:gene == Gene SJ20383 == * transcription-direction: ** positive * right-end-position: ** 189480 * left-end-position: ** 180625 * centisome-position: ** 86.81348...") |
(Created page with "Category:gene == Gene SJ22353 == * transcription-direction: ** positive * right-end-position: ** 103013 * left-end-position: ** 88243 * centisome-position: ** 15.250728...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ22353 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 103013 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 88243 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 15.250728 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] | |
− | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[ACID-PHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-5822]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | ** Category: [[orthology]] | |
− | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | *** source: [[ | ||
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− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6348]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
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** '''1''' reactions found over '''1''' reactions in the full pathway | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[NADPHOS-DEPHOS-PWY]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5083]] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[NAD-BIOSYNTHESIS-II]] | ||
+ | ** '''4''' reactions found over '''3''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=103013}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=88243}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=15.250728 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 14:45, 5 January 2021
Contents
Gene SJ22353
- transcription-direction:
- positive
- right-end-position:
- 103013
- left-end-position:
- 88243
- centisome-position:
- 15.250728
Organism(s) associated with this gene
Reaction(s) associated
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ACID-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-5822
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6348
- 1 reactions found over 1 reactions in the full pathway
- NADPHOS-DEPHOS-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-5083
- 5 reactions found over 6 reactions in the full pathway
- NAD-BIOSYNTHESIS-II
- 4 reactions found over 3 reactions in the full pathway