Difference between revisions of "SJ15809"

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(Created page with "Category:gene == Gene SJ05644 == * transcription-direction: ** positive * right-end-position: ** 54943 * left-end-position: ** 39039 * centisome-position: ** 43.445213...")
(Created page with "Category:gene == Gene SJ07367 == * transcription-direction: ** negative * right-end-position: ** 63757 * left-end-position: ** 55547 * centisome-position: ** 80.79799...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05644 ==
+
== Gene SJ07367 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 54943
+
** 63757
 
* left-end-position:
 
* left-end-position:
−
** 39039
+
** 55547
 
* centisome-position:
 
* centisome-position:
−
** 43.445213    
+
** 80.79799    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RIBOKIN-RXN]]
−
* [[ALCD19]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ALCDH_LPAREN_nadp_RPAREN_hi]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ALCDH_LPAREN_nadp_RPAREN_i]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ALDEHYDE-REDUCTASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GLUCURONATE-REDUCTASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GLYCEROL-DEHYDROGENASE-NADP+-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10717]]
+
* [[RXN-14223]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12078]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12484]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14023]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14102]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8772]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8773]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5525]]
+
* [[RIBOKIN-PWY]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY3DJ-35471]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=63757}}
−
* [[PWY-6307]]
+
{{#set: left-end-position=55547}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=80.79799   }}
−
* [[PWY-6693]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: nb reaction associated=2}}
−
* [[PWY-7178]]
+
{{#set: nb pathway associated=1}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5515]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5516]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=54943}}
 
−
{{#set: left-end-position=39039}}
 
−
{{#set: centisome-position=43.445213   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=15}}
 
−
{{#set: nb pathway associated=7}}
 

Revision as of 14:46, 5 January 2021

Gene SJ07367

  • transcription-direction:
    • negative
  • right-end-position:
    • 63757
  • left-end-position:
    • 55547
  • centisome-position:
    • 80.79799

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBOKIN-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15809&oldid=54685"