Difference between revisions of "SJ09958"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ03056 == * transcription-direction: ** positive * right-end-position: ** 46102 * left-end-position: ** 42313 * centisome-position: ** 7.98092 =...") |
(Created page with "Category:gene == Gene SJ07587 == * transcription-direction: ** negative * right-end-position: ** 37438 * left-end-position: ** 26288 * centisome-position: ** 40.525375...") |
||
Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07587 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 37438 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 26288 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 40.525375 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[CARBODEHYDRAT-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | ** Category: [[orthology]] | |
− | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | |
− | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
− | + | * [[RXN0-5224]] | |
− | |||
− | |||
− | |||
− | ** Category: [[ | ||
− | *** source: [[ | ||
− | |||
− | |||
− | *** source: [[ | ||
− | * [[RXN0- | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6142]] |
− | ** '''8''' reactions found over ''' | + | ** '''10''' reactions found over '''13''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWYQT-4429]] |
− | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
− | * [[PWY- | + | * [[CYANCAT-PWY]] |
− | ** '''6''' reactions found over ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5744]] |
− | ** ''' | + | ** '''4''' reactions found over '''13''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | * [[PWY-5789]] |
− | {{#set: right-end-position= | + | ** '''8''' reactions found over '''18''' reactions in the full pathway |
− | {{#set: left-end-position= | + | * [[PWY-5743]] |
− | {{#set: centisome-position= | + | ** '''5''' reactions found over '''13''' reactions in the full pathway |
− | {{#set: organism associated=S. | + | * [[PWY-241]] |
− | {{#set: nb reaction associated= | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
− | {{#set: nb pathway associated= | + | * [[PWY-7115]] |
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-7117]] | ||
+ | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=37438}} | ||
+ | {{#set: left-end-position=26288}} | ||
+ | {{#set: centisome-position=40.525375 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=2}} | ||
+ | {{#set: nb pathway associated=9}} |
Revision as of 14:50, 5 January 2021
Contents
Gene SJ07587
- transcription-direction:
- negative
- right-end-position:
- 37438
- left-end-position:
- 26288
- centisome-position:
- 40.525375
Organism(s) associated with this gene
Reaction(s) associated
- CARBODEHYDRAT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-5224
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6142
- 10 reactions found over 13 reactions in the full pathway
- PWYQT-4429
- 2 reactions found over 2 reactions in the full pathway
- CYANCAT-PWY
- 2 reactions found over 3 reactions in the full pathway
- PWY-5744
- 4 reactions found over 13 reactions in the full pathway
- PWY-5789
- 8 reactions found over 18 reactions in the full pathway
- PWY-5743
- 5 reactions found over 13 reactions in the full pathway
- PWY-241
- 5 reactions found over 6 reactions in the full pathway
- PWY-7115
- 9 reactions found over 10 reactions in the full pathway
- PWY-7117
- 10 reactions found over 12 reactions in the full pathway