Difference between revisions of "SJ21621"

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(Created page with "Category:gene == Gene SJ09463 == * transcription-direction: ** negative * right-end-position: ** 413302 * left-end-position: ** 403350 * centisome-position: ** 97.07815...")
(Created page with "Category:gene == Gene SJ19409 == * transcription-direction: ** positive * right-end-position: ** 78373 * left-end-position: ** 54841 * centisome-position: ** 8.650369...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ09463 ==
+
== Gene SJ19409 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 413302
+
** 78373
 
* left-end-position:
 
* left-end-position:
** 403350
+
** 54841
 
* centisome-position:
 
* centisome-position:
** 97.07815    
+
** 8.650369    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[CYCLOEUCALENOL-CYCLOISOMERASE-RXN]]
+
* [[HISTONE-ACETYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN11876]]
+
{{#set: transcription-direction=positive}}
** Category: [[manual]]
+
{{#set: right-end-position=78373}}
*** source: [[reaction_creator_sjap]]; tool: [[unknown-tool]]; comment: curation sterols (girard et al.)
+
{{#set: left-end-position=54841}}
== Pathway(s) associated ==
+
{{#set: centisome-position=8.650369   }}
* [[PWY-7155]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
** '''4''' reactions found over '''6''' reactions in the full pathway
+
{{#set: nb reaction associated=1}}
* [[PWY-2541]]
 
** '''11''' reactions found over '''35''' reactions in the full pathway
 
* [[PWY-8191]]
 
** '''13''' reactions found over '''n.a''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=413302}}
 
{{#set: left-end-position=403350}}
 
{{#set: centisome-position=97.07815   }}
 
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=3}}
 

Revision as of 14:51, 5 January 2021

Gene SJ19409

  • transcription-direction:
    • positive
  • right-end-position:
    • 78373
  • left-end-position:
    • 54841
  • centisome-position:
    • 8.650369

Organism(s) associated with this gene

Reaction(s) associated