Difference between revisions of "SJ01422"

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(Created page with "Category:gene == Gene SJ14528 == * transcription-direction: ** positive * right-end-position: ** 436505 * left-end-position: ** 415962 * centisome-position: ** 58.36941...")
(Created page with "Category:gene == Gene SJ06589 == * transcription-direction: ** negative * right-end-position: ** 32930 * left-end-position: ** 19012 * centisome-position: ** 24.55474...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14528 ==
+
== Gene SJ06589 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 436505
+
** 32930
 
* left-end-position:
 
* left-end-position:
−
** 415962
+
** 19012
 
* centisome-position:
 
* centisome-position:
−
** 58.36941    
+
** 24.55474    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
+
* [[2.7.12.1-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ACOACXr]]
+
* [[RXN-14906]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BIOTIN-CARBOXYL-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5055]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8443]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7388]]
+
* [[PWY-5381]]
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
** '''6''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-6679]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=32930}}
−
* [[PWY-5744]]
+
{{#set: left-end-position=19012}}
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
{{#set: centisome-position=24.55474   }}
−
* [[PWY-5743]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5789]]
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY0-1264]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6722]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-4381]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=436505}}
 
−
{{#set: left-end-position=415962}}
 
−
{{#set: centisome-position=58.36941   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
 
{{#set: nb reaction associated=4}}
 
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=1}}

Revision as of 14:52, 5 January 2021

Gene SJ06589

  • transcription-direction:
    • negative
  • right-end-position:
    • 32930
  • left-end-position:
    • 19012
  • centisome-position:
    • 24.55474

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01422&oldid=58162"