Difference between revisions of "NITRITE-REDUCTASE-CYTOCHROME-RXN"

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(Created page with "Category:reaction == Reaction RXN-11855 == * direction: ** left-to-right * common-name: ** rna (cytosine38-c5)-methyltransferase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN == * direction: ** left-to-right * common-name: ** 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase * e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11855 ==
+
== Reaction 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** rna (cytosine38-c5)-methyltransferase
+
** 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.204 ec-2.1.1.204]
+
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Cytosine-38-in-tRNAs]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[5-Methylcytosine-38-in-tRNAs]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[OCTAPRENYL-METHOXY-BENZOQUINONE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[OCTAPRENYL-METHYL-METHOXY-BENZQ]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00150]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ11297]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02842]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02693]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07072]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ20751]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11757]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00609]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic):
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic):
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42957 42957]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27775 27775]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00595 R00595]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=rna (cytosine38-c5)-methyltransferase}}
+
{{#set: common-name=2-octaprenyl-6-methoxy-1,4-benzoquinone methylase}}
−
{{#set: ec-number=ec-2.1.1.204}}
+
{{#set: ec-number=ec-2.1.1.201}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:01, 5 January 2021

Reaction 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic):
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic):
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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