Difference between revisions of "RXN-15088"

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(Created page with "Category:reaction == Reaction RXN-4210 == * direction: ** left-to-right * common-name: ** 5-dehydroavenasterol δ7 reductase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction URIDINEKIN-RXN == * direction: ** left-to-right * common-name: ** uridine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.48 ec-2.7...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-4210 ==
+
== Reaction URIDINEKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 5-dehydroavenasterol δ7 reductase
+
** uridine kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.21 ec-1.3.1.21]
+
** [http://enzyme.expasy.org/EC/2.7.1.48 ec-2.7.1.48]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-4126]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-4127]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[URIDINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UMP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02661]]
+
* Gene: [[SJ15690]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16689]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02034]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ06565]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2541]], phytosterol biosynthesis (plants):
+
* [[PWY-7193]], pyrimidine ribonucleosides salvage I:
−
** '''11''' reactions found over '''35''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16826 16826]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07487 R07487]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00964 R00964]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
 +
** [http://www.uniprot.org/uniprot/P47622 P47622]
 +
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
 +
** [http://www.uniprot.org/uniprot/P44533 P44533]
 +
** [http://www.uniprot.org/uniprot/P27515 P27515]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=5-dehydroavenasterol δ7 reductase}}
+
{{#set: common-name=uridine kinase}}
−
{{#set: ec-number=ec-1.3.1.21}}
+
{{#set: ec-number=ec-2.7.1.48}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:02, 5 January 2021

Reaction URIDINEKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • uridine kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7193, pyrimidine ribonucleosides salvage I:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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