Difference between revisions of "3-ISOPROPYLMALDEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction DIMETHUROPORDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** precorrin-2 dehydrogenase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction RXN-16821 == * direction: ** left-to-right * common-name: ** trna-5-taurinomethyluridine 2-sulfurtransferase * ec-number: ** [http://enzyme.e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIMETHUROPORDEHYDROG-RXN ==
+
== Reaction RXN-16821 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** precorrin-2 dehydrogenase
+
** trna-5-taurinomethyluridine 2-sulfurtransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.76 ec-1.3.1.76]
+
** [http://enzyme.expasy.org/EC/2.8.1.14 ec-2.8.1.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SIROHYDROCHLORIN]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Donor-H2]][c] '''+''' 1 [[TUM1-S-sulfanylcysteine]][c] '''+''' 1 [[tRNA-containing-5-taurinomethyluridine]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TUM1-L-cysteine]][c] '''+''' 1 [[tRNA-with-5-taurinomethyl-2-thiouridine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12313]]
+
* Gene: [[SJ13939]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00619]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
+
* [[PWY-7889]], tRNA-uridine 2-thiolation (mammalian mitochondria):
−
** '''4''' reactions found over '''15''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5196]], factor 430 biosynthesis:
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5194]], siroheme biosynthesis:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15613 15613]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03947 R03947]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=precorrin-2 dehydrogenase}}
+
{{#set: common-name=trna-5-taurinomethyluridine 2-sulfurtransferase}}
−
{{#set: ec-number=ec-1.3.1.76}}
+
{{#set: ec-number=ec-2.8.1.14}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:03, 5 January 2021

Reaction RXN-16821

  • direction:
    • left-to-right
  • common-name:
    • trna-5-taurinomethyluridine 2-sulfurtransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7889, tRNA-uridine 2-thiolation (mammalian mitochondria):
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3-ISOPROPYLMALDEHYDROG-RXN&oldid=63207"