Difference between revisions of "RXN-8789"
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(Created page with "Category:reaction == Reaction ACECOATRANS-RXN-HEXANOYL-COA/ACET//HEXANOATE/ACETYL-COA.40. == * direction: ** left-to-right == Reaction formula == * 1.0 ACET[c] '''+'''...") |
(Created page with "Category:reaction == Reaction RXN-8642 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN-8642 == |
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** nadp-dependent isocitrate dehydrogenase | ||
+ | * synonymous: | ||
+ | ** idp | ||
+ | ** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase | ||
+ | ** idp1 | ||
+ | ** isocitrate (nadp) dehydrogenase | ||
+ | ** nadp+-icdh | ||
+ | ** nadp isocitric dehydrogenase | ||
+ | ** idp2 | ||
+ | ** nadp+-linked isocitrate dehydrogenase | ||
+ | ** nadp-linked isocitrate dehydrogenase | ||
+ | ** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase | ||
+ | ** nadp-specific isocitrate dehydrogenase | ||
+ | ** nadp-dependent isocitric dehydrogenase | ||
+ | ** dual-cofactor-specific isocitrate dehydrogenase | ||
+ | ** idh (ambiguous) | ||
+ | ** isocitrate dehydrogenase (nadp-dependent) | ||
+ | ** idp3 | ||
+ | ** nadp+-idh | ||
+ | ** oxalsuccinic decarboxylase | ||
+ | </div> | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ08749]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=nadp-dependent isocitrate dehydrogenase}} | ||
+ | {{#set: synonymous=nadp-linked isocitrate dehydrogenase|nadp-dependent isocitric dehydrogenase|idp2|nadp-specific isocitrate dehydrogenase|nadp+-icdh|idp|nadp+-idh|nadp isocitric dehydrogenase|idp1|isocitrate (nadp) dehydrogenase|isocitrate dehydrogenase (nadp-dependent)|idp3|nadp+-linked isocitrate dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|dual-cofactor-specific isocitrate dehydrogenase|idh (ambiguous)|oxalsuccinic decarboxylase}} | ||
+ | {{#set: nb gene associated=1}} | ||
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:03, 5 January 2021
Contents
Reaction RXN-8642
- direction:
- reversible
- common-name:
- nadp-dependent isocitrate dehydrogenase
- synonymous:
- idp
- triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
- idp1
- isocitrate (nadp) dehydrogenase
- nadp+-icdh
- nadp isocitric dehydrogenase
- idp2
- nadp+-linked isocitrate dehydrogenase
- nadp-linked isocitrate dehydrogenase
- isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
- nadp-specific isocitrate dehydrogenase
- nadp-dependent isocitric dehydrogenase
- dual-cofactor-specific isocitrate dehydrogenase
- idh (ambiguous)
- isocitrate dehydrogenase (nadp-dependent)
- idp3
- nadp+-idh
- oxalsuccinic decarboxylase
Reaction formula
- 1 OXALO-SUCCINATE[c] + 1 PROTON[c] <=> 1 2-KETOGLUTARATE[c] + 1 CARBON-DIOXIDE[c]
Gene(s) associated with this reaction
- Gene: SJ08749
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links