Difference between revisions of "SJ02112"

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(Created page with "Category:gene == Gene SJ03223 == * transcription-direction: ** negative * right-end-position: ** 127010 * left-end-position: ** 122576 * centisome-position: ** 23.208998...")
 
(Created page with "Category:gene == Gene SJ16883 == * transcription-direction: ** positive * right-end-position: ** 252893 * left-end-position: ** 246796 * centisome-position: ** 89.51484...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03223 ==
+
== Gene SJ16883 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 127010
+
** 252893
 
* left-end-position:
 
* left-end-position:
−
** 122576
+
** 246796
 
* centisome-position:
 
* centisome-position:
−
** 23.208998    
+
** 89.51484    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[RXN-12587]]
+
* [[GSHTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12588]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[GST-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14382]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14384]]
+
* [[RXN-13673]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14385]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-15680]]
−
* [[RXN-14386]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15881]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9787]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-308]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[SELENOCYSTEINE-LYASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6842]]
−
* [[PWY-6892]]
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-4061]]
−
* [[PWY-7250]]
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY66-374]]
−
* [[PWY-6891]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7112]]
−
* [[PWY0-1021]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[PWY-7533]]
−
* [[PWY-6823]]
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-7904]]
+
{{#set: right-end-position=252893}}
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
{{#set: left-end-position=246796}}
−
* [[PWY-7892]]
+
{{#set: centisome-position=89.51484   }}
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7891]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7889]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7888]]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=127010}}
 
−
{{#set: left-end-position=122576}}
 
−
{{#set: centisome-position=23.208998   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=5}}

Revision as of 14:22, 26 August 2019

Gene SJ16883

  • transcription-direction:
    • positive
  • right-end-position:
    • 252893
  • left-end-position:
    • 246796
  • centisome-position:
    • 89.51484

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02112&oldid=18411"