Difference between revisions of "SJ16279"
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(Created page with "Category:gene == Gene SJ21972 == * transcription-direction: ** positive * right-end-position: ** 248261 * left-end-position: ** 242033 * centisome-position: ** 41.227844...") |
(Created page with "Category:gene == Gene SJ00877 == * transcription-direction: ** positive * right-end-position: ** 76097 * left-end-position: ** 65701 * centisome-position: ** 40.82709...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ00877 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 76097 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 65701 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 40.82709 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | + | * [[GTP-CYCLOHYDRO-I-RXN]] | |
− | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
− | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
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− | *** source: [[ | ||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
− | + | * [[PWY0-1433]] | |
− | * [[ | + | ** '''1''' reactions found over '''4''' reactions in the full pathway |
+ | * [[PWY-7442]] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6703]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7852]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6147]] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5664]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6983]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5663]] | ||
** '''3''' reactions found over '''4''' reactions in the full pathway | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
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{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=76097}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=65701}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=40.82709 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
Revision as of 15:18, 5 January 2021
Contents
Gene SJ00877
- transcription-direction:
- positive
- right-end-position:
- 76097
- left-end-position:
- 65701
- centisome-position:
- 40.82709
Organism(s) associated with this gene
Reaction(s) associated
- GTP-CYCLOHYDRO-I-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY0-1433
- 1 reactions found over 4 reactions in the full pathway
- PWY-7442
- 3 reactions found over 7 reactions in the full pathway
- PWY-6703
- 1 reactions found over 4 reactions in the full pathway
- PWY-7852
- 2 reactions found over 3 reactions in the full pathway
- PWY-6147
- 5 reactions found over 5 reactions in the full pathway
- PWY-5664
- 2 reactions found over 4 reactions in the full pathway
- PWY-6983
- 2 reactions found over 4 reactions in the full pathway
- PWY-5663
- 3 reactions found over 4 reactions in the full pathway