Difference between revisions of "SJ07729"

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(Created page with "Category:gene == Gene SJ04919 == * transcription-direction: ** positive * right-end-position: ** 35449 * left-end-position: ** 16745 * centisome-position: ** 17.082027...")
(Created page with "Category:gene == Gene SJ10266 == * transcription-direction: ** positive * right-end-position: ** 167142 * left-end-position: ** 162212 * centisome-position: ** 41.146954...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04919 ==
+
== Gene SJ10266 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 35449
+
** 167142
 
* left-end-position:
 
* left-end-position:
−
** 16745
+
** 162212
 
* centisome-position:
 
* centisome-position:
−
** 17.082027    
+
** 41.146954    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[FRUCTOKINASE-RXN]]
+
* [[CARBOXYMETHYLENEBUTENOLIDASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUCOKIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-9868]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[HEXOKINASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[MANNKIN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6193]]
−
* [[PWY-3801]]
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6087]]
−
* [[PWY-621]]
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-6089]]
−
* [[P122-PWY]]
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-4101]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5384]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[SUCROSEUTIL2-PWY]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6531]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[SUCUTIL-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-2723]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY0-1182]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5661]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[GLYCOCAT-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7238]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[P124-PWY]]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[GLUCOSE1PMETAB-PWY]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7385]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2722]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[TREDEGLOW-PWY]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5514]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-3861]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6140]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6992]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=35449}}
+
{{#set: right-end-position=167142}}
−
{{#set: left-end-position=16745}}
+
{{#set: left-end-position=162212}}
−
{{#set: centisome-position=17.082027   }}
+
{{#set: centisome-position=41.146954   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=23}}
+
{{#set: nb pathway associated=3}}

Revision as of 15:21, 5 January 2021

Gene SJ10266

  • transcription-direction:
    • positive
  • right-end-position:
    • 167142
  • left-end-position:
    • 162212
  • centisome-position:
    • 41.146954

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6193
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6087
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6089
    • 1 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07729&oldid=69646"