Difference between revisions of "SJ21800"

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(Created page with "Category:gene == Gene SJ01631 == * transcription-direction: ** negative * right-end-position: ** 23838 * left-end-position: ** 23200 * centisome-position: ** 15.771048...")
(Created page with "Category:gene == Gene SJ21565 == * transcription-direction: ** positive * right-end-position: ** 409098 * left-end-position: ** 390894 * centisome-position: ** 65.67693...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01631 ==
+
== Gene SJ21565 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 23838
+
** 409098
 
* left-end-position:
 
* left-end-position:
−
** 23200
+
** 390894
 
* centisome-position:
 
* centisome-position:
−
** 15.771048    
+
** 65.67693    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
{{#set: right-end-position=23838}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=23200}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=15.771048   }}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10958]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6368]]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6580]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6367]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=409098}}
 +
{{#set: left-end-position=390894}}
 +
{{#set: centisome-position=65.67693   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=3}}

Revision as of 15:21, 5 January 2021

Gene SJ21565

  • transcription-direction:
    • positive
  • right-end-position:
    • 409098
  • left-end-position:
    • 390894
  • centisome-position:
    • 65.67693

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-6580
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6367
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21800&oldid=69976"