Difference between revisions of "SJ20782"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ15746 == * transcription-direction: ** negative * right-end-position: ** 158536 * left-end-position: ** 147158 * centisome-position: ** 12.087544...")
 
(Created page with "Category:gene == Gene SJ10735 == * transcription-direction: ** positive * right-end-position: ** 21841 * left-end-position: ** 11164 * centisome-position: ** 41.180374...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15746 ==
+
== Gene SJ10735 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 158536
+
** 21841
 
* left-end-position:
 
* left-end-position:
−
** 147158
+
** 11164
 
* centisome-position:
 
* centisome-position:
−
** 12.087544    
+
** 41.180374    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[MALATE-DEH-RXN]]
+
* [[TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: right-end-position=21841}}
−
* [[PWY-6969]]
+
{{#set: left-end-position=11164}}
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
{{#set: centisome-position=41.180374   }}
−
* [[P23-PWY]]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[GLYOXYLATE-BYPASS]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-1622]]
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7383]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P42-PWY]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5392]]
 
−
** '''6''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5690]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7115]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[TCA]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-561]]
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[P105-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-398]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P108-PWY]]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=158536}}
 
−
{{#set: left-end-position=147158}}
 
−
{{#set: centisome-position=12.087544   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=20}}
 

Revision as of 14:22, 26 August 2019

Gene SJ10735

  • transcription-direction:
    • positive
  • right-end-position:
    • 21841
  • left-end-position:
    • 11164
  • centisome-position:
    • 41.180374

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20782&oldid=18733"