Difference between revisions of "SJ07112"
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(Created page with "Category:gene == Gene SJ02173 == * transcription-direction: ** negative * right-end-position: ** 11161 * left-end-position: ** 8956 * centisome-position: ** 1.647823 =...") |
(Created page with "Category:gene == Gene SJ12557 == * transcription-direction: ** positive * right-end-position: ** 14152 * left-end-position: ** 8657 * centisome-position: ** 54.24525 =...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ12557 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 14152 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 8657 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 54.24525 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[GLUTATHIONE-PEROXIDASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[GSHTRAN-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[GST-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* [[PEROXID-RXN]] | * [[PEROXID-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[PROSTAGLANDIN-D-SYNTHASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-13673]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
Line 19: | Line 35: | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* [[RXN-15288]] | * [[RXN-15288]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-15680]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
Line 27: | Line 46: | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[DETOX1-PWY-1]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-4081]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6842]] | ||
+ | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-4061]] | ||
+ | ** '''4''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY66-374]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7112]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY-7214]] | * [[PWY-7214]] | ||
** '''1''' reactions found over '''2''' reactions in the full pathway | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
* [[PWY-7445]] | * [[PWY-7445]] | ||
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7533]] | ||
+ | ** '''3''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-5466]] | * [[PWY-5466]] | ||
** '''2''' reactions found over '''10''' reactions in the full pathway | ** '''2''' reactions found over '''10''' reactions in the full pathway | ||
Line 40: | Line 75: | ||
* [[PWY-5461]] | * [[PWY-5461]] | ||
** '''1''' reactions found over '''1''' reactions in the full pathway | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
− | {{#set: transcription-direction= | + | </div> |
− | {{#set: right-end-position= | + | {{#set: transcription-direction=positive}} |
− | {{#set: left-end-position= | + | {{#set: right-end-position=14152}} |
− | {{#set: centisome-position= | + | {{#set: left-end-position=8657}} |
+ | {{#set: centisome-position=54.24525 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=11}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=13}} |
Revision as of 15:24, 5 January 2021
Contents
Gene SJ12557
- transcription-direction:
- positive
- right-end-position:
- 14152
- left-end-position:
- 8657
- centisome-position:
- 54.24525
Organism(s) associated with this gene
Reaction(s) associated
- GLUTATHIONE-PEROXIDASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GSHTRAN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GST-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PEROXID-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PROSTAGLANDIN-D-SYNTHASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13673
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14240
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15288
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15680
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17352
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-8635
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- DETOX1-PWY-1
- 4 reactions found over 4 reactions in the full pathway
- PWY-4081
- 3 reactions found over 3 reactions in the full pathway
- PWY-6842
- 5 reactions found over 9 reactions in the full pathway
- PWY-4061
- 4 reactions found over 8 reactions in the full pathway
- PWY66-374
- 2 reactions found over 5 reactions in the full pathway
- PWY-7112
- 3 reactions found over 4 reactions in the full pathway
- PWY-7214
- 1 reactions found over 2 reactions in the full pathway
- PWY-7445
- 1 reactions found over 4 reactions in the full pathway
- PWY-7533
- 3 reactions found over 9 reactions in the full pathway
- PWY-5466
- 2 reactions found over 10 reactions in the full pathway
- PWY-6824
- 2 reactions found over 10 reactions in the full pathway
- PWY-5469
- 2 reactions found over 8 reactions in the full pathway
- PWY-5461
- 1 reactions found over 1 reactions in the full pathway