Difference between revisions of "SJ04385"
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(Created page with "Category:gene == Gene SJ07112 == * transcription-direction: ** negative * right-end-position: ** 144922 * left-end-position: ** 139340 * centisome-position: ** 30.009218...") |
(Created page with "Category:gene == Gene SJ06121 == * transcription-direction: ** positive * right-end-position: ** 116824 * left-end-position: ** 80027 * centisome-position: ** 16.628712...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ06121 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 116824 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 80027 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 16.628712 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[BETA-UREIDOPROPIONASE-RXN]] |
| − | |||
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-11210]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-3982]] |
| − | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-43]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[ | + | * [[ARGDEG-III-PWY]] |
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-6430]] |
| − | + | ** '''1''' reactions found over '''3''' reactions in the full pathway | |
| − | + | {{#set: transcription-direction=positive}} | |
| − | ** '''1''' reactions found over ''' | + | {{#set: right-end-position=116824}} |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=80027}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=16.628712 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 15:24, 5 January 2021
Contents
Gene SJ06121
- transcription-direction:
- positive
- right-end-position:
- 116824
- left-end-position:
- 80027
- centisome-position:
- 16.628712
Organism(s) associated with this gene
Reaction(s) associated
- BETA-UREIDOPROPIONASE-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- N-CARBAMOYLPUTRESCINE-AMIDASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-11210
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-3982
- 1 reactions found over 3 reactions in the full pathway
- PWY-43
- 3 reactions found over 3 reactions in the full pathway
- ARGDEG-III-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-6430
- 1 reactions found over 3 reactions in the full pathway
