Difference between revisions of "RXN-17132"

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(Created page with "Category:reaction == Reaction PANTOATE-BETA-ALANINE-LIG-RXN == * direction: ** left-to-right * common-name: ** pantothenate synthetase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction RXN-16095 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PANTOATE-BETA-ALANINE-LIG-RXN ==
+
== Reaction RXN-16095 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** pantothenate synthetase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.2.1 ec-6.3.2.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 1 [[L-PANTOATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-17346]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-17347]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13797]]
+
* Gene: [[SJ06969]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
+
* [[PWY-6598]], sciadonate biosynthesis:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes):
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals):
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10913 10913]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02473 R02473]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P31663 P31663]
 
−
** [http://www.uniprot.org/uniprot/Q9PIK2 Q9PIK2]
 
−
** [http://www.uniprot.org/uniprot/P56061 P56061]
 
−
** [http://www.uniprot.org/uniprot/P57035 P57035]
 
−
** [http://www.uniprot.org/uniprot/Q9ZN52 Q9ZN52]
 
−
** [http://www.uniprot.org/uniprot/Q09673 Q09673]
 
−
** [http://www.uniprot.org/uniprot/O24210 O24210]
 
−
** [http://www.uniprot.org/uniprot/Q9X713 Q9X713]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pantothenate synthetase}}
+
{{#set: ec-number=ec-1.1.1.330}}
−
{{#set: ec-number=ec-6.3.2.1}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:31, 5 January 2021

Reaction RXN-16095

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6598, sciadonate biosynthesis:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes):
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-17132&oldid=75157"