Difference between revisions of "SJ20370"
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(Created page with "Category:gene == Gene SJ02238 == * transcription-direction: ** positive * right-end-position: ** 191118 * left-end-position: ** 161980 * centisome-position: ** 70.27606...") |
(Created page with "Category:gene == Gene SJ00821 == * transcription-direction: ** negative * right-end-position: ** 395052 * left-end-position: ** 380855 * centisome-position: ** 68.145386...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ00821 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 395052 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 380855 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 68.145386 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[CHORISMATE-SYNTHASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6163]] |
| − | ** '''6''' reactions found over ''' | + | ** '''6''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=395052}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=380855}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=68.145386 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
Revision as of 14:23, 26 August 2019
Contents
Gene SJ00821
- transcription-direction:
- negative
- right-end-position:
- 395052
- left-end-position:
- 380855
- centisome-position:
- 68.145386
Organism(s) associated with this gene
Reaction(s) associated
- CHORISMATE-SYNTHASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6163
- 6 reactions found over 5 reactions in the full pathway
