Difference between revisions of "Glycoprotein-Asn-oligosaccharides"
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(Created page with "Category:gene == Gene SJ10816 == * transcription-direction: ** positive * right-end-position: ** 207211 * left-end-position: ** 201640 * centisome-position: ** 52.60425...") |
(Created page with "Category:gene == Gene SJ09480 == * transcription-direction: ** positive * right-end-position: ** 30908 * left-end-position: ** 25958 * centisome-position: ** 63.98955...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ09480 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 30908 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 25958 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 63.98955 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[3.1.3.46-RXN]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[ | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * [[6 | + | * [[6-PHOSPHOFRUCTO-2-KINASE-RXN]] |
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[ | + | * [[SUGAR-PHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
− | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | * [[PWY66-423]] |
− | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=30908}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=25958}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=63.98955 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} |
Revision as of 14:23, 26 August 2019
Contents
Gene SJ09480
- transcription-direction:
- positive
- right-end-position:
- 30908
- left-end-position:
- 25958
- centisome-position:
- 63.98955
Organism(s) associated with this gene
Reaction(s) associated
- 3.1.3.46-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 6-PHOSPHOFRUCTO-2-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SUGAR-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY66-423
- 2 reactions found over 2 reactions in the full pathway