Difference between revisions of "SJ12304"

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(Created page with "Category:gene == Gene SJ17787 == * transcription-direction: ** negative * right-end-position: ** 74520 * left-end-position: ** 66885 * centisome-position: ** 26.148096...")
(Created page with "Category:gene == Gene SJ07200 == * transcription-direction: ** negative * right-end-position: ** 627237 * left-end-position: ** 610107 * centisome-position: ** 41.757374...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ17787 ==
+
== Gene SJ07200 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
** 74520
+
** 627237
 
* left-end-position:
 
* left-end-position:
** 66885
+
** 610107
 
* centisome-position:
 
* centisome-position:
** 26.148096    
+
** 41.757374    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[GDPPYPHOSKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ACID-PHOSPHATASE-RXN]]
+
* [[GTPPYPHOSKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[PPGPPSYN-RXN]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
* [[RXN-5822]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-6427]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6348]]
+
* [[PPGPPMET-PWY]]
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[NADPHOS-DEPHOS-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5083]]
 
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
** '''5''' reactions found over '''6''' reactions in the full pathway
* [[NAD-BIOSYNTHESIS-II]]
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
{{#set: right-end-position=74520}}
+
{{#set: right-end-position=627237}}
{{#set: left-end-position=66885}}
+
{{#set: left-end-position=610107}}
{{#set: centisome-position=26.148096   }}
+
{{#set: centisome-position=41.757374   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=4}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}

Revision as of 13:04, 14 January 2021

Gene SJ07200

  • transcription-direction:
    • negative
  • right-end-position:
    • 627237
  • left-end-position:
    • 610107
  • centisome-position:
    • 41.757374

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PPGPPMET-PWY
    • 5 reactions found over 6 reactions in the full pathway