Difference between revisions of "SJ01397"

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(Created page with "Category:metabolite == Metabolite 6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6 == * common-name: ** (5s)-hpete * smiles: ** cccccc=ccc=ccc=cc=cc(oo)cccc([o-])=o * inchi-key: ** jnuun...")
(Created page with "Category:gene == Gene SJ19937 == * transcription-direction: ** negative * right-end-position: ** 208599 * left-end-position: ** 199351 * centisome-position: ** 91.66912...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite 6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6 ==
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== Gene SJ19937 ==
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* common-name:
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* transcription-direction:
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** (5s)-hpete
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** negative
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* smiles:
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* right-end-position:
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** cccccc=ccc=ccc=cc=cc(oo)cccc([o-])=o
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** 208599
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* inchi-key:
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* left-end-position:
−
** jnuunuqhxiofda-jgklhwiesa-m
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** 199351
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* molecular-weight:
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* centisome-position:
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** 335.462
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** 91.66912   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-8647]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
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* [[3.6.4.5-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(5s)-hpete}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=jnuunuqhxiofda-jgklhwiesa-m}}
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* [[ATPASE-RXN]]
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{{#set: molecular-weight=335.462}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=208599}}
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{{#set: left-end-position=199351}}
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{{#set: centisome-position=91.66912    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 13:07, 14 January 2021

Gene SJ19937

  • transcription-direction:
    • negative
  • right-end-position:
    • 208599
  • left-end-position:
    • 199351
  • centisome-position:
    • 91.66912

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01397&oldid=84511"