Difference between revisions of "CPDMETA-13651"
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(Created page with "Category:gene == Gene SJ00708 == * transcription-direction: ** positive * right-end-position: ** 10186 * left-end-position: ** 240 * centisome-position: ** 4.25092500e-2 =...") |
(Created page with "Category:gene == Gene SJ13101 == * transcription-direction: ** negative * right-end-position: ** 83344 * left-end-position: ** 75148 * centisome-position: ** 21.737545...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13101 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 83344 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 75148 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 21.737545 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN- | + | * [[RXN-12615]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-7682]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[RXN0-901]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[XANTHINE-OXIDASE-RXN]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | == Pathway(s) associated == |
| + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
| + | * [[PWY-6596]] | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[P164-PWY]] | ||
| + | ** '''6''' reactions found over '''17''' reactions in the full pathway | ||
| + | * [[SALVADEHYPOX-PWY]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-5497]] | ||
| + | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
| + | * [[PWY-6606]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6607]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6999]] | ||
| + | ** '''2''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-6608]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6538]] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-5695]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | </div> | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=83344}} | ||
| + | {{#set: left-end-position=75148}} | ||
| + | {{#set: centisome-position=21.737545 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| + | {{#set: nb pathway associated=10}} | ||
Revision as of 14:23, 26 August 2019
Contents
Gene SJ13101
- transcription-direction:
- negative
- right-end-position:
- 83344
- left-end-position:
- 75148
- centisome-position:
- 21.737545
Organism(s) associated with this gene
Reaction(s) associated
- RXN-12615
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-7682
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-901
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- XANTHINE-OXIDASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6596
- 7 reactions found over 8 reactions in the full pathway
- P164-PWY
- 6 reactions found over 17 reactions in the full pathway
- SALVADEHYPOX-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- PWY-6606
- 4 reactions found over 4 reactions in the full pathway
- PWY-6607
- 3 reactions found over 4 reactions in the full pathway
- PWY-6999
- 2 reactions found over 9 reactions in the full pathway
- PWY-6608
- 4 reactions found over 4 reactions in the full pathway
- PWY-6538
- 2 reactions found over 7 reactions in the full pathway
- PWY-5695
- 4 reactions found over 4 reactions in the full pathway
