Difference between revisions of "ATDTM"
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(Created page with "Category:reaction == Reaction KYNURENINE-3-MONOOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** kynurenine 3-monooxygenase * ec-number: ** [http://enzyme.e...") |
(Created page with "Category:reaction == Reaction BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN == * direction: ** reversible * common-name: ** benzaldehyde dehydrogenase (nad+) * ec-number: ** [http:/...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** benzaldehyde dehydrogenase (nad+) |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.2.1.28 ec-1.2.1.28] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[BENZALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[BENZOATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ06456]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ06470]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6766]], salicin biosynthesis: |
− | ** ''' | + | ** '''1''' reactions found over '''6''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6763]], salicortin biosynthesis: |
− | ** ''' | + | ** '''1''' reactions found over '''11''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6444]], benzoate biosynthesis II (CoA-independent, non-β-oxidative): |
− | ** ''' | + | ** '''1''' reactions found over '''4''' reactions in the full pathway |
− | * [[PWY- | + | * [[TOLUENE-DEG-CATECHOL-PWY]], toluene degradation to benzoate: |
− | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
+ | * [[PWY-1501]], mandelate degradation I: | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6446]], benzoate biosynthesis III (CoA-dependent, non-β-oxidative): | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | |||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | |||
− | |||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01419 R01419] |
− | {{#set: direction= | + | * UNIPROT: |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P43503 P43503] |
− | {{#set: ec-number=ec-1. | + | {{#set: direction=reversible}} |
+ | {{#set: common-name=benzaldehyde dehydrogenase (nad+)}} | ||
+ | {{#set: ec-number=ec-1.2.1.28}} | ||
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 13:17, 14 January 2021
Contents
Reaction BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN
- direction:
- reversible
- common-name:
- benzaldehyde dehydrogenase (nad+)
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ06456
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ06470
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6766, salicin biosynthesis:
- 1 reactions found over 6 reactions in the full pathway
- PWY-6763, salicortin biosynthesis:
- 1 reactions found over 11 reactions in the full pathway
- PWY-6444, benzoate biosynthesis II (CoA-independent, non-β-oxidative):
- 1 reactions found over 4 reactions in the full pathway
- TOLUENE-DEG-CATECHOL-PWY, toluene degradation to benzoate:
- 1 reactions found over 3 reactions in the full pathway
- PWY-1501, mandelate degradation I:
- 1 reactions found over 5 reactions in the full pathway
- PWY-6446, benzoate biosynthesis III (CoA-dependent, non-β-oxidative):
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links