Difference between revisions of "RXN-12460"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-17926 == * direction: ** left-to-right == Reaction formula == * 1 5-Phospho-RNA[c] '''+''' 2 PROTON[c] '''+''' 1 RNA-Ligase-L-l...") |
(Created page with "Category:reaction == Reaction 3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** 3-hydroxybutyrate dehydrogenase * ec-number: ** [http://e...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction 3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** 3-hydroxybutyrate dehydrogenase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/1.1.1.30 ec-1.1.1.30] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[CPD-335]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ20292]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ20291]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05277]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21312]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05276]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ10028]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05275]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05274]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21322]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ06127]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY66-368]], ketolysis: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY66-367]], ketogenesis: | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20524 20524] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
− | {{#set: reconstruction category=annotation}} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01361 R01361] |
− | {{#set: reconstruction tool=pathwaytools}} | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P29147 P29147] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02338 Q02338] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02337 Q02337] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=3-hydroxybutyrate dehydrogenase}} | ||
+ | {{#set: ec-number=ec-1.1.1.30}} | ||
+ | {{#set: nb gene associated=10}} | ||
+ | {{#set: nb pathway associated=2}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Revision as of 13:18, 14 January 2021
Contents
Reaction 3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN
- direction:
- reversible
- common-name:
- 3-hydroxybutyrate dehydrogenase
- ec-number:
Reaction formula
- 1 CPD-335[c] + 1 NAD[c] <=> 1 3-KETOBUTYRATE[c] + 1 NADH[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ20292
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ20291
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ05277
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ21312
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ05276
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ10028
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ05275
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ05274
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ21322
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ06127
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY66-368, ketolysis:
- 2 reactions found over 3 reactions in the full pathway
- PWY66-367, ketogenesis:
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links