Difference between revisions of "1.5.5.1-RXN"
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(Created page with "Category:reaction == Reaction ATP-ADENYLYLTRANSFERASE-RXN == * direction: ** reversible * common-name: ** atp adenylyltransferase * ec-number: ** [http://enzyme.expasy.org...") |
(Created page with "Category:reaction == Reaction HOMOSERKIN-RXN == * direction: ** left-to-right * common-name: ** homoserine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.39 ec-...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction HOMOSERKIN-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** homoserine kinase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2.7. | + | ** [http://enzyme.expasy.org/EC/2.7.1.39 ec-2.7.1.39] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[HOMO-SER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ11564]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-702]], L-methionine biosynthesis II (plants): | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01771 R01771] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P27722 P27722] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9PIZ3 Q9PIZ3] |
− | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/P04948 P04948] |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/Q9UZV7 Q9UZV7] |
− | {{#set: ec-number=ec-2.7. | + | ** [http://www.uniprot.org/uniprot/Q9CGD7 Q9CGD7] |
− | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/P44504 P44504] |
− | {{#set: nb pathway associated= | + | ** [http://www.uniprot.org/uniprot/P52991 P52991] |
+ | ** [http://www.uniprot.org/uniprot/P00547 P00547] | ||
+ | ** [http://www.uniprot.org/uniprot/P07128 P07128] | ||
+ | ** [http://www.uniprot.org/uniprot/P17423 P17423] | ||
+ | ** [http://www.uniprot.org/uniprot/P73646 P73646] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=homoserine kinase}} | ||
+ | {{#set: ec-number=ec-2.7.1.39}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=2}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:20, 14 January 2021
Contents
Reaction HOMOSERKIN-RXN
- direction:
- left-to-right
- common-name:
- homoserine kinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 HOMO-SER[c] => 1 ADP[c] + 1 O-PHOSPHO-L-HOMOSERINE[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ11564
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- HOMOSER-THRESYN-PWY, L-threonine biosynthesis:
- 2 reactions found over 2 reactions in the full pathway
- PWY-702, L-methionine biosynthesis II (plants):
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: