Difference between revisions of "PDHe3mr"
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(Created page with "Category:reaction == Reaction RXN-14455 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.6.3.54 ec-3.6.3.54] == Reaction formula == * 1 AT...") |
(Created page with "Category:reaction == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** l-tryptophan:2-oxoglutarate aminotransferase * ec-number: **...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** l-tryptophan:2-oxoglutarate aminotransferase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ04188]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
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== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-581]], indole-3-acetate biosynthesis II: | ||
+ | ** '''5''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol): | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate): | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria): | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: ec-number=ec- | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
− | {{#set: nb pathway associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684] |
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=l-tryptophan:2-oxoglutarate aminotransferase}} | ||
+ | {{#set: ec-number=ec-2.6.1.27}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=4}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 13:21, 14 January 2021
Contents
Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN
- direction:
- reversible
- common-name:
- l-tryptophan:2-oxoglutarate aminotransferase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 TRP[c] <=> 1 GLT[c] + 1 INDOLE_PYRUVATE[c]
Gene(s) associated with this reaction
- Gene: SJ04188
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-581, indole-3-acetate biosynthesis II:
- 5 reactions found over 12 reactions in the full pathway
- PWY-5081, L-tryptophan degradation VIII (to tryptophol):
- 1 reactions found over 4 reactions in the full pathway
- TRPKYNCAT-PWY, L-tryptophan degradation IV (via indole-3-lactate):
- 1 reactions found over 2 reactions in the full pathway
- TRPIAACAT-PWY, indole-3-acetate biosynthesis VI (bacteria):
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links