Difference between revisions of "TUM1-L-cysteine"
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(Created page with "Category:gene == Gene SJ20726 == * transcription-direction: ** negative * right-end-position: ** 68386 * left-end-position: ** 52439 * centisome-position: ** 25.668776...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8642 RXN-8642] == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overfl...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8642 RXN-8642] == |
− | * | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** | + | * direction: |
− | * | + | ** reversible |
− | ** | + | * common-name: |
− | * | + | ** nadp-dependent isocitrate dehydrogenase |
− | ** | + | * synonymous: |
− | * | + | ** isocitrate dehydrogenase (nadp-dependent) |
− | ** | + | ** nadp+-linked isocitrate dehydrogenase |
− | == | + | ** oxalsuccinic decarboxylase |
− | * [[ | + | ** idh (ambiguous) |
− | == | + | ** nadp+-icdh |
− | * [[ | + | ** nadp isocitric dehydrogenase |
+ | ** nadp+-idh | ||
+ | ** idp2 | ||
+ | ** idp1 | ||
+ | ** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase | ||
+ | ** dual-cofactor-specific isocitrate dehydrogenase | ||
+ | ** nadp-dependent isocitric dehydrogenase | ||
+ | ** nadp-linked isocitrate dehydrogenase | ||
+ | ** idp | ||
+ | ** nadp-specific isocitrate dehydrogenase | ||
+ | ** idp3 | ||
+ | ** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase | ||
+ | ** isocitrate (nadp) dehydrogenase | ||
+ | </div> | ||
+ | == Reaction formula == | ||
+ | * 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] | ||
+ | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ08749]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | + | ** Category: [[orthology]] | |
− | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
− | + | == Pathway(s) == | |
− | + | == Reconstruction information == | |
− | ** Category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | *** | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | + | == External links == | |
− | + | * RHEA: | |
− | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384] | |
− | + | * LIGAND-RXN: | |
− | * | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268] |
− | + | {{#set: direction=reversible}} | |
− | * | + | {{#set: common-name=nadp-dependent isocitrate dehydrogenase}} |
− | + | {{#set: synonymous=nadp+-icdh|nadp-linked isocitrate dehydrogenase|idp3|nadp+-idh|oxalsuccinic decarboxylase|idp|nadp isocitric dehydrogenase|idp1|idp2|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|dual-cofactor-specific isocitrate dehydrogenase|nadp+-linked isocitrate dehydrogenase|isocitrate dehydrogenase (nadp-dependent)|nadp-dependent isocitric dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|idh (ambiguous)|isocitrate (nadp) dehydrogenase|nadp-specific isocitrate dehydrogenase}} | |
− | + | {{#set: nb gene associated=1}} | |
− | == | + | {{#set: nb pathway associated=0}} |
− | * | + | {{#set: reconstruction category=orthology|annotation}} |
− | * | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
− | * [ | + | {{#set: reconstruction comment=n.a}} |
− | * | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
− | |||
− | * | ||
− | * [ | ||
− | |||
− | {{#set: | ||
− | {{#set: | ||
− | {{#set: | ||
− | {{#set: | ||
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Revision as of 14:24, 26 August 2019
Contents
Reaction RXN-8642
- direction:
- reversible
- common-name:
- nadp-dependent isocitrate dehydrogenase
- synonymous:
- isocitrate dehydrogenase (nadp-dependent)
- nadp+-linked isocitrate dehydrogenase
- oxalsuccinic decarboxylase
- idh (ambiguous)
- nadp+-icdh
- nadp isocitric dehydrogenase
- nadp+-idh
- idp2
- idp1
- isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
- dual-cofactor-specific isocitrate dehydrogenase
- nadp-dependent isocitric dehydrogenase
- nadp-linked isocitrate dehydrogenase
- idp
- nadp-specific isocitrate dehydrogenase
- idp3
- triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
- isocitrate (nadp) dehydrogenase
Reaction formula
- 1 OXALO-SUCCINATE[c] + 1 PROTON[c] <=> 1 2-KETOGLUTARATE[c] + 1 CARBON-DIOXIDE[c]
Gene(s) associated with this reaction
- Gene: SJ08749
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links