Difference between revisions of "SJ14909"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ13678 == * transcription-direction: ** negative * right-end-position: ** 374131 * left-end-position: ** 365697 * centisome-position: ** 27.595526...")
(Created page with "Category:gene == Gene SJ13101 == * transcription-direction: ** negative * right-end-position: ** 83344 * left-end-position: ** 75148 * centisome-position: ** 21.737545...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13678 ==
+
== Gene SJ13101 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 374131
+
** 83344
 
* left-end-position:
 
* left-end-position:
−
** 365697
+
** 75148
 
* centisome-position:
 
* centisome-position:
−
** 27.595526    
+
** 21.737545    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-12615]]
−
* [[3PGAREARR-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15509]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15510]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15511]]
+
* [[RXN-7682]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15512]]
+
* [[RXN0-901]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15513]]
+
* [[XANTHINE-OXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-6142]]
+
* [[P164-PWY]]
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''6''' reactions found over '''17''' reactions in the full pathway
−
* [[PWY-7003]]
+
* [[PWY-6596]]
−
** '''8''' reactions found over '''6''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7218]]
+
* [[SALVADEHYPOX-PWY]]
−
** '''7''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[GLYCOLYSIS]]
+
* [[PWY-5497]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''10''' reactions found over '''24''' reactions in the full pathway
−
* [[P341-PWY]]
+
* [[PWY-6606]]
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5723]]
+
* [[PWY-6607]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[P124-PWY]]
+
* [[PWY-6999]]
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-2221]]
+
* [[PWY-6608]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5484]]
+
* [[PWY-6538]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-1042]]
+
* [[PWY-5695]]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-6405]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-1622]]
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=374131}}
+
{{#set: right-end-position=83344}}
−
{{#set: left-end-position=365697}}
+
{{#set: left-end-position=75148}}
−
{{#set: centisome-position=27.595526   }}
+
{{#set: centisome-position=21.737545   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=19}}
+
{{#set: nb pathway associated=10}}

Revision as of 18:50, 14 January 2021

Gene SJ13101

  • transcription-direction:
    • negative
  • right-end-position:
    • 83344
  • left-end-position:
    • 75148
  • centisome-position:
    • 21.737545

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-6596
    • 7 reactions found over 8 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY-6606
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6607
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6999
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-6608
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6538
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5695
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14909&oldid=96393"