Difference between revisions of "SJ17854"
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(Created page with "Category:gene == Gene SJ09777 == * transcription-direction: ** negative * right-end-position: ** 206033 * left-end-position: ** 191109 * centisome-position: ** 47.031334...") |
(Created page with "Category:gene == Gene SJ12177 == * transcription-direction: ** negative * right-end-position: ** 119735 * left-end-position: ** 105518 * centisome-position: ** 29.204124...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ12177 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 119735 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 105518 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 29.204124 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * | + | * [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]] |
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[ | + | * [[RXN-15090]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | * [[TRIGLSYN-PWY]] |
− | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
+ | * [[PWY-7420]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=119735}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=105518}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=29.204124 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Revision as of 18:50, 14 January 2021
Contents
Gene SJ12177
- transcription-direction:
- negative
- right-end-position:
- 119735
- left-end-position:
- 105518
- centisome-position:
- 29.204124
Organism(s) associated with this gene
Reaction(s) associated
- 2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-15090
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- TRIGLSYN-PWY
- 5 reactions found over 7 reactions in the full pathway
- PWY-7420
- 4 reactions found over 4 reactions in the full pathway