Difference between revisions of "CPD-14419"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LANOSTEROL-SYNTHASE-RXN LANOSTEROL-SYNTHASE-RXN] == * direction: ** left-to-right * common-name: **...")
 
(Created page with "Category:gene == Gene SJ07149 == * transcription-direction: ** positive * right-end-position: ** 60951 * left-end-position: ** 33852 * centisome-position: ** 48.443737...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LANOSTEROL-SYNTHASE-RXN LANOSTEROL-SYNTHASE-RXN] ==
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== Gene SJ07149 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* common-name:
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* right-end-position:
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** lanosterol synthase
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** 60951
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* ec-number:
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* left-end-position:
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** [http://enzyme.expasy.org/EC/5.4.99.7 ec-5.4.99.7]
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** 33852
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== Reaction formula ==
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* centisome-position:
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* 1 [[EPOXYSQUALENE]][c] '''=>''' 1 [[LANOSTEROL]][c]
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** 48.443737   
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[SJ09945]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[3.4.25.1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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** Category: [[orthology]]
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* [[PWY-6132]], lanosterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6132 PWY-6132]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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== Reconstruction information  ==
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{{#set: right-end-position=60951}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: left-end-position=33852}}
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== External links  ==
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{{#set: centisome-position=48.443737    }}
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* RHEA:
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14622 14622]
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{{#set: nb reaction associated=1}}
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03199 R03199]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P48449 P48449]
 
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** [http://www.uniprot.org/uniprot/Q10231 Q10231]
 
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** [http://www.uniprot.org/uniprot/Q04782 Q04782]
 
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** [http://www.uniprot.org/uniprot/P38604 P38604]
 
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** [http://www.uniprot.org/uniprot/Q59080 Q59080]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=lanosterol synthase}}
 
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{{#set: ec-number=ec-5.4.99.7}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 14:24, 26 August 2019

Gene SJ07149

  • transcription-direction:
    • positive
  • right-end-position:
    • 60951
  • left-end-position:
    • 33852
  • centisome-position:
    • 48.443737

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-14419&oldid=21399"