Difference between revisions of "50S-Ribosomal-subunit-protein-L16-Arg"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TROPINE-DEHYDROGENASE-RXN TROPINE-DEHYDROGENASE-RXN] == * direction: ** reversible * common-name: *...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAMIN-PYROPHOSPHOKINASE-RXN THIAMIN-PYROPHOSPHOKINASE-RXN] == * direction: ** left-to-right * com...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TROPINE-DEHYDROGENASE-RXN TROPINE-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAMIN-PYROPHOSPHOKINASE-RXN THIAMIN-PYROPHOSPHOKINASE-RXN] ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** tropinone reductase
+
** thiamine pyrophosphokinase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.206 ec-1.1.1.206]
+
** [http://enzyme.expasy.org/EC/2.7.6.2 ec-2.7.6.2]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADP]][c] '''+''' 1 [[TROPINE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TROPINONE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[THIAMINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18483]]
+
* Gene: [[SJ14636]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7341]], superpathway of hyoscyamine and scopolamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7341 PWY-7341]
+
* [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907]
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-5317]], hyoscyamine and scopolamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5317 PWY-5317]
+
* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908]
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6898]], thiamine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6898 PWY-6898]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18360 18360]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11577 11577]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02832 R02832]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00619 R00619]
{{#set: direction=reversible}}
+
* UNIPROT:
{{#set: common-name=tropinone reductase}}
+
** [http://www.uniprot.org/uniprot/P35202 P35202]
{{#set: ec-number=ec-1.1.1.206}}
+
** [http://www.uniprot.org/uniprot/P41888 P41888]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=thiamine pyrophosphokinase}}
 +
{{#set: ec-number=ec-2.7.6.2}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:24, 26 August 2019

Reaction THIAMIN-PYROPHOSPHOKINASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • thiamine pyrophosphokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6907, thiamine diphosphate biosynthesis III (Staphylococcus): PWY-6907
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6908, thiamine diphosphate biosynthesis IV (eukaryotes): PWY-6908
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7356, thiamine salvage IV (yeast): PWY-7356
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6898, thiamine salvage III: PWY-6898
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links