Difference between revisions of "SJ03348"

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(Created page with "Category:gene == Gene SJ05141 == * transcription-direction: ** positive * right-end-position: ** 8145 * left-end-position: ** 3287 * centisome-position: ** 0.6553174 =...")
(Created page with "Category:gene == Gene SJ05198 == * transcription-direction: ** negative * right-end-position: ** 316553 * left-end-position: ** 310697 * centisome-position: ** 62.071247...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ05141 ==
+
== Gene SJ05198 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 8145
+
** 316553
 
* left-end-position:
 
* left-end-position:
** 3287
+
** 310697
 
* centisome-position:
 
* centisome-position:
** 0.6553174    
+
** 62.071247    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[3.1.3.16-RXN]]
+
* [[RXN-9839]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
== Pathway(s) associated ==
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[PWY-6082]]
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
** Category: [[annotation]]
+
* [[PWY-6073]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
** '''3''' reactions found over '''3''' reactions in the full pathway
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=316553}}
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
+
{{#set: left-end-position=310697}}
** Category: [[annotation]]
+
{{#set: centisome-position=62.071247   }}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=8145}}
 
{{#set: left-end-position=3287}}
 
{{#set: centisome-position=0.6553174   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=2}}

Revision as of 18:51, 14 January 2021

Gene SJ05198

  • transcription-direction:
    • negative
  • right-end-position:
    • 316553
  • left-end-position:
    • 310697
  • centisome-position:
    • 62.071247

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073
    • 3 reactions found over 3 reactions in the full pathway