Difference between revisions of "CPD-17368"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7985 RXN-7985] == * direction: ** left-to-right * common-name: ** violaxanthin de-epoxidase **...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12728 RXN-12728] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7985 RXN-7985] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12728 RXN-12728] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
+
* ec-number:
** violaxanthin de-epoxidase
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** [http://enzyme.expasy.org/EC/2.5.1 ec-2.5.1]
** antheraxanthin de-epoxidase
 
* synonymous:
 
** vde
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ASCORBATE]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[WATER]][c]
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* 1 [[L-SELENOCYSTEINE]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[CPD-13717]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19927]]
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* Gene: [[SJ20026]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ03764]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20456]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
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* [[PWY-6936]], seleno-amino acid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21801 21801]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07179 R07179]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=antheraxanthin de-epoxidase|violaxanthin de-epoxidase}}
+
{{#set: ec-number=ec-2.5.1}}
{{#set: synonymous=vde}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 14:24, 26 August 2019

Reaction RXN-12728

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6936, seleno-amino acid biosynthesis (plants): PWY-6936
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links