Difference between revisions of "ATGD"
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(Created page with "Category:reaction == Reaction DNA-LIGASE-ATP-RXN == * direction: ** left-to-right * common-name: ** dna ligase (atp) * ec-number: ** [http://enzyme.expasy.org/EC/6.5.1.7 e...") |
(Created page with "Category:reaction == Reaction LTAA-RXN == * direction: ** left-to-right * common-name: ** l-allo-threonine aldolase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.48 e...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction LTAA-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** l-allo-threonine aldolase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.2.48 ec-4.1.2.48] |
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.2.49 ec-4.1.2.49] |
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== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[L-ALLO-THREONINE]][c] '''=>''' 1 [[ACETALD]][c] '''+''' 1 [[GLY]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ06446]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | + | * Gene: [[SJ12304]] | |
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− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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== Pathway(s) == | == Pathway(s) == | ||
== Reconstruction information == | == Reconstruction information == | ||
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | + | * RHEA: | |
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26209 26209] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R06171 R06171] |
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{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=l-allo-threonine aldolase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-4.1.2.48|ec-4.1.2.49}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 19:03, 14 January 2021
Contents
Reaction LTAA-RXN
- direction:
- left-to-right
- common-name:
- l-allo-threonine aldolase
- ec-number:
Reaction formula
- 1 L-ALLO-THREONINE[c] => 1 ACETALD[c] + 1 GLY[c]
Gene(s) associated with this reaction
- Gene: SJ06446
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ12304
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links